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Creators/Authors contains: "Guerrero, Jorge"

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  1. Free, publicly-accessible full text available March 22, 2026
  2. Free, publicly-accessible full text available January 1, 2026
  3. Abstract While the archival digital memory industry approaches its physical limits, the demand is significantly increasing, therefore alternatives emerge. Recent efforts have demonstrated DNA’s enormous potential as a digital storage medium with superior information durability, capacity, and energy consumption. However, the majority of the proposed systems require on-demand de-novo DNA synthesis techniques that produce a large amount of toxic waste and therefore are not industrially scalable and environmentally friendly. Inspired by the architecture of semiconductor memory devices and recent developments in gene editing, we created a molecular digital data storage system called “DNA Mutational Overwriting Storage” (DMOS) that stores information by leveraging combinatorial, addressable, orthogonal, and independent in vitro CRISPR base-editing reactions to write data on a blank pool of greenly synthesized DNA tapes. As a proof of concept, this work illustrates writing and accurately reading of both a bitmap representation of our school’s logo and the title of this study on the DNA tapes. 
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  4. Negative interactions between people and wildlife pose a significant challenge to their coexistence. Past research on human–wildlife interactions has largely focused on conflicts involving carnivores in rural areas. Additional research is needed in urban areas to examine the full array of negative and positive interactions between people and wildlife. In this study, we have conducted interviews in the desert metropolis of Phoenix, Arizona (USA), to explore residents’ everyday interactions with wildlife where they live. Our multifaceted approach examines interactions involving physical contact and observational experiences, as well as associated attitudinal and behavioral responses and actions toward wildlife. Overall, the qualitative analysis of residents’ narratives identified two distinct groups: people who are indifferent toward wildlife where they live, and those who appreciate and steward wildlife. Instead of revealing conflicts and negative interactions toward wildlife, our findings underscore the positive interactions that can foster human wellbeing in urban areas. The holistic approach presented herein can advance knowledge and the management of coexistence, which involves not only managing conflicts but also tolerance, acceptance, and stewardship. Understanding diverse human–wildlife interactions and managing coexistence can advance both wildlife conservation and human wellbeing in cities. 
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  5. Abstract Deoxyribonucleic acid (DNA) is emerging as an alternative archival memory technology. Recent advancements in DNA synthesis and sequencing have both increased the capacity and decreased the cost of storing information in de novo synthesized DNA pools. In this survey, we review methods for translating digital data to and/or from DNA molecules. An emphasis is placed on methods which have been validated by storing and retrieving real-world data via in-vitro experiments. 
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  6. Polymer optical fibers (POFs) are playing an important role in industrial applications nowadays due to their ease of handling and resilience to bending and environmental effects. A POF can tolerate a bending radius of less than 20 mm, it can work in environments with temperatures ranging from −55 °C to +105 °C, and its lifetime is around 20 years. In this paper, we propose a novel, rigorous, and efficient computational model to estimate the most important parameters that determine the characteristics of light propagation through a step-index polymer optical fiber (SI-POF). The model uses attenuation, diffusion, and mode group delay as functions of the propagation angle to characterize the optical power transmission in the SI-POF. Taking into consideration the mode group delay allows us to generalize the computational model to be applicable to POFs with different index profiles. In particular, we use experimental measurements of spatial distributions and frequency responses to derive accurate parameters for our SI-POF simulation model. The experimental data were measured at different fiber lengths according to the cut-back method. This method consists of taking several measurements such as frequency responses, angular intensity distributions, and optical power measurements over a long length of fiber (>100 m), then cutting back the fiber while maintaining the same launching conditions and repeating the measurements on the shorter lengths of fiber. The model derivation uses an objective function to minimize the differences between the experimental measurements and the simulated results. The use of the matrix exponential method (MEM) to implement the SI-POF model results in a computationally efficient model that is suitable for POF-based system-level studies. The efficiency gain is due to the independence of the calculation time with respect to the fiber length, in contrast to the classic analytical solutions of the time-dependent power flow equation. The robustness of the proposed model is validated by calculating the goodness-of-fit of the model predictions relative to experimental data. 
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